Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs829623 chr2:30755612 G/C 6.43E-7 117 38.33 45.87 13.23 KM Plot
THYM rs829636 chr2:30737801 T/G 5.0E-7 117 38.33 45.87 13.23 KM Plot
THYM rs829638 chr2:30738382 G/A 4.49E-7 118 38.58 45.87 13.23 KM Plot
THYM rs829645 chr2:30696720 A/G 3.24E-7 119 38.58 46.23 13.23 KM Plot
THYM rs829647 chr2:30718993 T/C 3.34E-7 118 38.83 46.23 13.23 KM Plot
THYM rs829648 chr2:30718809 A/G 3.34E-7 118 38.83 46.23 13.23 KM Plot
THYM rs829649 chr2:30718260 C/T 3.13E-7 119 38.83 45.87 13.23 KM Plot
THYM rs829650 chr2:30718241 A/G 3.13E-7 119 38.83 45.87 13.23 KM Plot
THYM rs829651 chr2:30717010 C/G 3.13E-7 119 38.83 45.87 13.23 KM Plot
THYM rs829658 chr2:30728359 T/G 4.49E-7 118 38.58 45.87 13.23 KM Plot
THYM rs829686 chr2:30705820 T/C 3.24E-7 119 38.58 46.23 13.23 KM Plot
THYM rs829687 chr2:30705706 G/A 3.24E-7 119 38.58 46.23 13.23 KM Plot
THYM rs829690 chr2:30662023 G/A 4.95E-5 118 38.13 50.07 33.25 KM Plot
THYM rs829693 chr2:30657761 C/T 3.02E-10 119 38.13 50.07 13.23 KM Plot
THYM rs837717 chr19:49237747 C/T 2.36E-6 114 11.58 53.27 38.13 KM Plot